Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CiitaP79621 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CiitaP79621 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.1□□□□□ -0.31
CiitaP79621 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.1□□□□□ -0.31
CiitaP79621 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CiitaP79621 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CiitaP79621 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CiitaP79621 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.1□□□□□ -0.31
CiitaP79621 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.1□□□□□ -0.31
CiitaP79621 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CiitaP79621 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CiitaP79621 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CiitaP79621 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CiitaP79621 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CiitaP79621 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CiitaP79621 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CiitaP79621 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CiitaP79621 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CiitaP79621 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CiitaP79621 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CiitaP79621 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
CiitaP79621 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.09□□□□□ -0.31
CiitaP79621 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.09□□□□□ -0.31
CiitaP79621 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.09□□□□□ -0.31
CiitaP79621 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.09□□□□□ -0.31
CiitaP79621 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Gm23251-201ENSMUST00000103773 110 ntBASIC13.09□□□□□ -0.31
CiitaP79621 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CiitaP79621 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CiitaP79621 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
CiitaP79621 Gm11331-201ENSMUST00000119764 288 ntBASIC13.09□□□□□ -0.31
CiitaP79621 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Gm23085-201ENSMUST00000157849 293 ntBASIC13.09□□□□□ -0.31
CiitaP79621 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CiitaP79621 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CiitaP79621 Gm20426-201ENSMUST00000173657 440 ntBASIC13.09□□□□□ -0.31
CiitaP79621 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CiitaP79621 Gm8100-201ENSMUST00000182906 988 ntBASIC13.09□□□□□ -0.31
CiitaP79621 Gm37986-201ENSMUST00000193285 383 ntBASIC13.09□□□□□ -0.31
CiitaP79621 Gm2965-201ENSMUST00000198365 343 ntBASIC13.09□□□□□ -0.31
CiitaP79621 Gm9555-201ENSMUST00000200908 583 ntBASIC13.09□□□□□ -0.31
CiitaP79621 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.09□□□□□ -0.31
CiitaP79621 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.09□□□□□ -0.31
CiitaP79621 Spcs1-203ENSMUST00000226374 592 ntBASIC13.09□□□□□ -0.31
CiitaP79621 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
CiitaP79621 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Map1b-203ENSMUST00000223725 2669 ntBASIC13.09□□□□□ -0.31
CiitaP79621 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CiitaP79621 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.09□□□□□ -0.31
CiitaP79621 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.09□□□□□ -0.31
CiitaP79621 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CiitaP79621 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
CiitaP79621 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.08□□□□□ -0.31
CiitaP79621 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CiitaP79621 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
CiitaP79621 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CiitaP79621 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CiitaP79621 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.08□□□□□ -0.32
CiitaP79621 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.08□□□□□ -0.32
CiitaP79621 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.08□□□□□ -0.32
CiitaP79621 Gm43378-201ENSMUST00000199336 582 ntBASIC13.08□□□□□ -0.32
CiitaP79621 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.08□□□□□ -0.32
CiitaP79621 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CiitaP79621 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CiitaP79621 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CiitaP79621 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms