Protein–RNA interactions for Protein: P70663

Sparcl1, SPARC-like protein 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sparcl1P70663 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
Sparcl1P70663 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sparcl1P70663 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.48□□□□□ -0.25
Sparcl1P70663 Gm12015-201ENSMUST00000117065 843 ntBASIC13.48□□□□□ -0.25
Sparcl1P70663 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.48□□□□□ -0.25
Sparcl1P70663 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Sparcl1P70663 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sparcl1P70663 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sparcl1P70663 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.48□□□□□ -0.25
Sparcl1P70663 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.48□□□□□ -0.25
Sparcl1P70663 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sparcl1P70663 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.47□□□□□ -0.25
Sparcl1P70663 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.47□□□□□ -0.25
Sparcl1P70663 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.47□□□□□ -0.25
Sparcl1P70663 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sparcl1P70663 Gm11331-201ENSMUST00000119764 288 ntBASIC13.47□□□□□ -0.25
Sparcl1P70663 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sparcl1P70663 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sparcl1P70663 Gm27552-201ENSMUST00000183351 62 ntBASIC13.47□□□□□ -0.25
Sparcl1P70663 Gm27844-201ENSMUST00000183613 62 ntBASIC13.47□□□□□ -0.25
Sparcl1P70663 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Gm17812-201ENSMUST00000204935 318 ntBASIC13.47□□□□□ -0.25
Sparcl1P70663 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.47□□□□□ -0.25
Sparcl1P70663 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sparcl1P70663 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.47□□□□□ -0.25
Sparcl1P70663 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Gm44745-201ENSMUST00000206563 2723 ntBASIC13.47□□□□□ -0.25
Sparcl1P70663 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.47□□□□□ -0.25
Sparcl1P70663 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sparcl1P70663 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sparcl1P70663 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Sparcl1P70663 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
Sparcl1P70663 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Gm12314-201ENSMUST00000118104 538 ntBASIC13.46□□□□□ -0.25
Sparcl1P70663 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.46□□□□□ -0.25
Sparcl1P70663 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.46□□□□□ -0.25
Sparcl1P70663 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Gm20426-201ENSMUST00000173657 440 ntBASIC13.46□□□□□ -0.25
Sparcl1P70663 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.46□□□□□ -0.25
Sparcl1P70663 Gm32999-201ENSMUST00000192693 562 ntBASIC13.46□□□□□ -0.25
Sparcl1P70663 Gm42937-201ENSMUST00000197360 752 ntBASIC13.46□□□□□ -0.25
Sparcl1P70663 Gm43947-201ENSMUST00000203019 959 ntBASIC13.46□□□□□ -0.25
Sparcl1P70663 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.46□□□□□ -0.25
Sparcl1P70663 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sparcl1P70663 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms