Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Msx3P70354 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.44□□□□□ -0.42
Msx3P70354 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Msx3P70354 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.44□□□□□ -0.42
Msx3P70354 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msx3P70354 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.44□□□□□ -0.42
Msx3P70354 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Msx3P70354 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.43□□□□□ -0.42
Msx3P70354 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Msx3P70354 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.43□□□□□ -0.42
Msx3P70354 Gm15547-201ENSMUST00000122152 333 ntBASIC12.43□□□□□ -0.42
Msx3P70354 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.43□□□□□ -0.42
Msx3P70354 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Msx3P70354 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.43□□□□□ -0.42
Msx3P70354 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Msx3P70354 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.43□□□□□ -0.42
Msx3P70354 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.43□□□□□ -0.42
Msx3P70354 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Gm18935-201ENSMUST00000212692 664 ntBASIC12.43□□□□□ -0.42
Msx3P70354 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.43□□□□□ -0.42
Msx3P70354 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Gm10312-201ENSMUST00000078515 489 ntBASIC12.43□□□□□ -0.42
Msx3P70354 Gm10478-201ENSMUST00000084451 396 ntBASIC12.43□□□□□ -0.42
Msx3P70354 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Msx3P70354 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.43□□□□□ -0.42
Msx3P70354 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Msx3P70354 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.43□□□□□ -0.42
Msx3P70354 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Msx3P70354 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.43□□□□□ -0.42
Msx3P70354 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Msx3P70354 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.42□□□□□ -0.42
Msx3P70354 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Msx3P70354 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.42□□□□□ -0.42
Msx3P70354 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.42□□□□□ -0.42
Msx3P70354 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Msx3P70354 Mir7085-201ENSMUST00000184353 66 ntBASIC12.42□□□□□ -0.42
Msx3P70354 Gm9230-201ENSMUST00000188228 532 ntBASIC12.42□□□□□ -0.42
Msx3P70354 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.42□□□□□ -0.42
Msx3P70354 Gm30285-201ENSMUST00000214614 422 ntBASIC12.42□□□□□ -0.42
Msx3P70354 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.42□□□□□ -0.42
Msx3P70354 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Msx3P70354 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.42□□□□□ -0.42
Msx3P70354 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.42□□□□□ -0.42
Msx3P70354 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Msx3P70354 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Msx3P70354 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Msx3P70354 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Msx3P70354 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.41□□□□□ -0.42
Msx3P70354 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Msx3P70354 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.41□□□□□ -0.42
Msx3P70354 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms