Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm25732-201ENSMUST00000175168 60 ntBASIC11.89□□□□□ -0.51
Lhx1P63006 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Lhx1P63006 Gm27390-201ENSMUST00000184516 176 ntBASIC11.89□□□□□ -0.51
Lhx1P63006 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.89□□□□□ -0.51
Lhx1P63006 Gm42599-201ENSMUST00000201308 469 ntBASIC11.89□□□□□ -0.51
Lhx1P63006 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Lhx1P63006 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.89□□□□□ -0.51
Lhx1P63006 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.89□□□□□ -0.51
Lhx1P63006 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.89□□□□□ -0.51
Lhx1P63006 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lhx1P63006 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Lhx1P63006 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.89□□□□□ -0.51
Lhx1P63006 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lhx1P63006 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.89□□□□□ -0.51
Lhx1P63006 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.88□□□□□ -0.51
Lhx1P63006 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.88□□□□□ -0.51
Lhx1P63006 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Gm12196-201ENSMUST00000120954 262 ntBASIC11.88□□□□□ -0.51
Lhx1P63006 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Mir5132-201ENSMUST00000175166 71 ntBASIC11.88□□□□□ -0.51
Lhx1P63006 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Gm18827-201ENSMUST00000188341 790 ntBASIC11.88□□□□□ -0.51
Lhx1P63006 Gm3332-201ENSMUST00000189337 928 ntBASIC11.88□□□□□ -0.51
Lhx1P63006 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.88□□□□□ -0.51
Lhx1P63006 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.88□□□□□ -0.51
Lhx1P63006 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.88□□□□□ -0.51
Lhx1P63006 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lhx1P63006 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.87□□□□□ -0.51
Lhx1P63006 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Lhx1P63006 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.87□□□□□ -0.51
Lhx1P63006 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Lhx1P63006 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.87□□□□□ -0.51
Lhx1P63006 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.87□□□□□ -0.51
Lhx1P63006 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.87□□□□□ -0.51
Lhx1P63006 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.87□□□□□ -0.51
Lhx1P63006 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.87□□□□□ -0.51
Lhx1P63006 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Gm12857-201ENSMUST00000117678 592 ntBASIC11.87□□□□□ -0.51
Lhx1P63006 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Lhx1P63006 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.87□□□□□ -0.51
Lhx1P63006 Gm25881-201ENSMUST00000157783 103 ntBASIC11.87□□□□□ -0.51
Lhx1P63006 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.87□□□□□ -0.51
Lhx1P63006 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.87□□□□□ -0.51
Lhx1P63006 Gm43138-201ENSMUST00000199123 708 ntBASIC11.87□□□□□ -0.51
Lhx1P63006 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Gm2553-201ENSMUST00000215986 605 ntBASIC11.87□□□□□ -0.51
Lhx1P63006 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.87□□□□□ -0.51
Lhx1P63006 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.87□□□□□ -0.51
Lhx1P63006 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lhx1P63006 Gm21811-201ENSMUST00000096485 930 ntBASIC11.87□□□□□ -0.51
Lhx1P63006 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Lhx1P63006 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms