Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ybx1P62960 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.4□□□□□ -0.42
Ybx1P62960 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ybx1P62960 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ybx1P62960 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ybx1P62960 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ybx1P62960 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Ybx1P62960 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ybx1P62960 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ybx1P62960 Gm11628-201ENSMUST00000117568 171 ntBASIC12.4□□□□□ -0.42
Ybx1P62960 Gm11956-201ENSMUST00000119525 512 ntBASIC12.4□□□□□ -0.42
Ybx1P62960 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ybx1P62960 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ybx1P62960 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.4□□□□□ -0.42
Ybx1P62960 Gm22144-201ENSMUST00000157402 102 ntBASIC12.4□□□□□ -0.42
Ybx1P62960 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ybx1P62960 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.4□□□□□ -0.42
Ybx1P62960 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.4□□□□□ -0.42
Ybx1P62960 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.4□□□□□ -0.42
Ybx1P62960 Gm18711-201ENSMUST00000199341 750 ntBASIC12.4□□□□□ -0.42
Ybx1P62960 Gm45398-201ENSMUST00000210561 165 ntBASIC12.4□□□□□ -0.42
Ybx1P62960 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ybx1P62960 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.4□□□□□ -0.42
Ybx1P62960 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ybx1P62960 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ybx1P62960 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ybx1P62960 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ybx1P62960 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ybx1P62960 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.4□□□□□ -0.42
Ybx1P62960 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ybx1P62960 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ybx1P62960 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ybx1P62960 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ybx1P62960 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.39□□□□□ -0.43
Ybx1P62960 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.39□□□□□ -0.43
Ybx1P62960 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ybx1P62960 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ybx1P62960 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.39□□□□□ -0.43
Ybx1P62960 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ybx1P62960 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.39□□□□□ -0.43
Ybx1P62960 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.39□□□□□ -0.43
Ybx1P62960 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.39□□□□□ -0.43
Ybx1P62960 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.39□□□□□ -0.43
Ybx1P62960 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ybx1P62960 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.39□□□□□ -0.43
Ybx1P62960 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.39□□□□□ -0.43
Ybx1P62960 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.39□□□□□ -0.43
Ybx1P62960 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ybx1P62960 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ybx1P62960 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.38□□□□□ -0.43
Ybx1P62960 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ybx1P62960 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.38□□□□□ -0.43
Ybx1P62960 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Ybx1P62960 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ybx1P62960 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.38□□□□□ -0.43
Ybx1P62960 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.38□□□□□ -0.43
Ybx1P62960 Gm8194-201ENSMUST00000159783 859 ntBASIC12.38□□□□□ -0.43
Ybx1P62960 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms