Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.76□□□□□ -0.69
Sf3b6P59708 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sf3b6P59708 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sf3b6P59708 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Sf3b6P59708 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.75□□□□□ -0.69
Sf3b6P59708 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.75□□□□□ -0.69
Sf3b6P59708 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm12390-201ENSMUST00000117897 397 ntBASIC10.75□□□□□ -0.69
Sf3b6P59708 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm11803-201ENSMUST00000119966 444 ntBASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.75□□□□□ -0.69
Sf3b6P59708 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm24644-201ENSMUST00000157114 139 ntBASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm23958-201ENSMUST00000157207 105 ntBASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm22331-201ENSMUST00000158066 136 ntBASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm8810-201ENSMUST00000172895 754 ntBASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC10.75□□□□□ -0.69
Sf3b6P59708 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.75□□□□□ -0.69
Sf3b6P59708 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm7561-201ENSMUST00000211203 886 ntBASIC10.75□□□□□ -0.69
Sf3b6P59708 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm19163-201ENSMUST00000223313 780 ntBASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm10146-201ENSMUST00000072739 309 ntBASIC10.75□□□□□ -0.69
Sf3b6P59708 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Sf3b6P59708 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sf3b6P59708 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sf3b6P59708 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.74□□□□□ -0.69
Sf3b6P59708 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.74□□□□□ -0.69
Sf3b6P59708 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sf3b6P59708 Cog3-203ENSMUST00000227473 4197 ntBASIC10.74□□□□□ -0.69
Sf3b6P59708 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Gm24830-201ENSMUST00000102024 166 ntBASIC10.74□□□□□ -0.69
Sf3b6P59708 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.74□□□□□ -0.69
Sf3b6P59708 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.74□□□□□ -0.69
Sf3b6P59708 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms