Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Usp5P56399 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.12□□□□□ -0.15
Usp5P56399 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp5P56399 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Usp5P56399 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Usp5P56399 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.12□□□□□ -0.15
Usp5P56399 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Usp5P56399 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Usp5P56399 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp5P56399 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp5P56399 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp5P56399 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Usp5P56399 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp5P56399 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp5P56399 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Usp5P56399 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp5P56399 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp5P56399 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp5P56399 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp5P56399 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp5P56399 Gm23200-201ENSMUST00000104379 132 ntBASIC14.11□□□□□ -0.15
Usp5P56399 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Usp5P56399 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp5P56399 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp5P56399 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp5P56399 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp5P56399 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.11□□□□□ -0.15
Usp5P56399 Gm17827-201ENSMUST00000211825 742 ntBASIC14.11□□□□□ -0.15
Usp5P56399 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.11□□□□□ -0.15
Usp5P56399 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.11□□□□□ -0.15
Usp5P56399 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.11□□□□□ -0.15
Usp5P56399 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp5P56399 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp5P56399 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.11□□□□□ -0.15
Usp5P56399 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp5P56399 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp5P56399 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp5P56399 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp5P56399 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.11□□□□□ -0.15
Usp5P56399 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp5P56399 Matn2-203ENSMUST00000226766 3252 ntBASIC14.1□□□□□ -0.15
Usp5P56399 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp5P56399 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.1□□□□□ -0.15
Usp5P56399 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.1□□□□□ -0.15
Usp5P56399 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usp5P56399 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.1□□□□□ -0.15
Usp5P56399 Mir5132-201ENSMUST00000175166 71 ntBASIC14.1□□□□□ -0.15
Usp5P56399 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.1□□□□□ -0.15
Usp5P56399 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Usp5P56399 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Usp5P56399 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp5P56399 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp5P56399 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.1□□□□□ -0.15
Usp5P56399 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.1□□□□□ -0.15
Usp5P56399 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp5P56399 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.1□□□□□ -0.15
Usp5P56399 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp5P56399 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms