Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.96□□□□□ -0.49
Pdx1P52946 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pdx1P52946 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pdx1P52946 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.96□□□□□ -0.49
Pdx1P52946 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pdx1P52946 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.96□□□□□ -0.49
Pdx1P52946 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.96□□□□□ -0.49
Pdx1P52946 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pdx1P52946 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.96□□□□□ -0.49
Pdx1P52946 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.96□□□□□ -0.49
Pdx1P52946 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.96□□□□□ -0.49
Pdx1P52946 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pdx1P52946 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pdx1P52946 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdx1P52946 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pdx1P52946 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Pdx1P52946 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Pdx1P52946 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.96□□□□□ -0.5
Pdx1P52946 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pdx1P52946 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pdx1P52946 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.96□□□□□ -0.5
Pdx1P52946 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pdx1P52946 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pdx1P52946 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pdx1P52946 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pdx1P52946 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pdx1P52946 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pdx1P52946 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Pdx1P52946 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.95□□□□□ -0.5
Pdx1P52946 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pdx1P52946 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.95□□□□□ -0.5
Pdx1P52946 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pdx1P52946 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Pdx1P52946 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Gm13296-201ENSMUST00000117854 997 ntBASIC11.95□□□□□ -0.5
Pdx1P52946 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.95□□□□□ -0.5
Pdx1P52946 Gm13665-201ENSMUST00000120830 528 ntBASIC11.95□□□□□ -0.5
Pdx1P52946 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.95□□□□□ -0.5
Pdx1P52946 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.95□□□□□ -0.5
Pdx1P52946 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.95□□□□□ -0.5
Pdx1P52946 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.95□□□□□ -0.5
Pdx1P52946 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.95□□□□□ -0.5
Pdx1P52946 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.95□□□□□ -0.5
Pdx1P52946 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.95□□□□□ -0.5
Pdx1P52946 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.95□□□□□ -0.5
Pdx1P52946 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.95□□□□□ -0.5
Pdx1P52946 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Pdx1P52946 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.95□□□□□ -0.5
Pdx1P52946 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Pdx1P52946 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.95□□□□□ -0.5
Pdx1P52946 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pdx1P52946 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pdx1P52946 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pdx1P52946 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.94□□□□□ -0.5
Pdx1P52946 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms