Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc3P49135 Gm26361-201ENSMUST00000158868 186 ntBASIC14.38□□□□□ -0.11
Ercc3P49135 Gm4034-201ENSMUST00000187674 480 ntBASIC14.38□□□□□ -0.11
Ercc3P49135 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ercc3P49135 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc3P49135 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ercc3P49135 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc3P49135 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Ercc3P49135 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc3P49135 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc3P49135 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.38□□□□□ -0.11
Ercc3P49135 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc3P49135 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc3P49135 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.38□□□□□ -0.11
Ercc3P49135 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc3P49135 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc3P49135 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Ercc3P49135 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.38□□□□□ -0.11
Ercc3P49135 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc3P49135 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc3P49135 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ercc3P49135 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc3P49135 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ercc3P49135 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.37□□□□□ -0.11
Ercc3P49135 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.37□□□□□ -0.11
Ercc3P49135 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.37□□□□□ -0.11
Ercc3P49135 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ercc3P49135 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ercc3P49135 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ercc3P49135 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.37□□□□□ -0.11
Ercc3P49135 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.37□□□□□ -0.11
Ercc3P49135 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.37□□□□□ -0.11
Ercc3P49135 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ercc3P49135 Gm12164-201ENSMUST00000121695 551 ntBASIC14.37□□□□□ -0.11
Ercc3P49135 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.37□□□□□ -0.11
Ercc3P49135 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.37□□□□□ -0.11
Ercc3P49135 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.37□□□□□ -0.11
Ercc3P49135 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.37□□□□□ -0.11
Ercc3P49135 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ercc3P49135 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.37□□□□□ -0.11
Ercc3P49135 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.37□□□□□ -0.11
Ercc3P49135 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.37□□□□□ -0.11
Ercc3P49135 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc3P49135 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ercc3P49135 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.36□□□□□ -0.11
Ercc3P49135 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.36□□□□□ -0.11
Ercc3P49135 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ercc3P49135 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ercc3P49135 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.36□□□□□ -0.11
Ercc3P49135 Gm13296-201ENSMUST00000117854 997 ntBASIC14.36□□□□□ -0.11
Ercc3P49135 Gm12997-201ENSMUST00000120207 640 ntBASIC14.36□□□□□ -0.11
Ercc3P49135 Gm13665-201ENSMUST00000120830 528 ntBASIC14.36□□□□□ -0.11
Ercc3P49135 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.36□□□□□ -0.11
Ercc3P49135 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.36□□□□□ -0.11
Ercc3P49135 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.36□□□□□ -0.11
Ercc3P49135 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.36□□□□□ -0.11
Ercc3P49135 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.36□□□□□ -0.11
Ercc3P49135 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.36□□□□□ -0.11
Ercc3P49135 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.36□□□□□ -0.11
Ercc3P49135 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ercc3P49135 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc3P49135 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.36□□□□□ -0.11
Ercc3P49135 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ercc3P49135 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.35□□□□□ -0.11
Ercc3P49135 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms