Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rfx1P48377 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Rfx1P48377 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx1P48377 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx1P48377 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.44□□□□□ -0.1
Rfx1P48377 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.44□□□□□ -0.1
Rfx1P48377 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx1P48377 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx1P48377 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx1P48377 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx1P48377 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx1P48377 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx1P48377 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx1P48377 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rfx1P48377 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC14.44□□□□□ -0.1
Rfx1P48377 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx1P48377 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx1P48377 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx1P48377 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx1P48377 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx1P48377 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.43□□□□□ -0.1
Rfx1P48377 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.43□□□□□ -0.1
Rfx1P48377 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Gm27847-201ENSMUST00000183711 107 ntBASIC14.43□□□□□ -0.1
Rfx1P48377 Gm27375-201ENSMUST00000183799 107 ntBASIC14.43□□□□□ -0.1
Rfx1P48377 Gm44405-201ENSMUST00000198952 126 ntBASIC14.43□□□□□ -0.1
Rfx1P48377 Gm17794-201ENSMUST00000220252 955 ntBASIC14.43□□□□□ -0.1
Rfx1P48377 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Gm6091-201ENSMUST00000098307 165 ntBASIC14.43□□□□□ -0.1
Rfx1P48377 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Rfx1P48377 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rfx1P48377 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.43□□□□□ -0.1
Rfx1P48377 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rfx1P48377 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx1P48377 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.42□□□□□ -0.1
Rfx1P48377 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Rfx1P48377 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rfx1P48377 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.42□□□□□ -0.1
Rfx1P48377 Gm36991-201ENSMUST00000191800 648 ntBASIC14.42□□□□□ -0.1
Rfx1P48377 Gm44958-201ENSMUST00000203734 736 ntBASIC14.42□□□□□ -0.1
Rfx1P48377 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.42□□□□□ -0.1
Rfx1P48377 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.42□□□□□ -0.1
Rfx1P48377 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.42□□□□□ -0.1
Rfx1P48377 Gm7561-201ENSMUST00000211203 886 ntBASIC14.42□□□□□ -0.1
Rfx1P48377 Gm39404-201ENSMUST00000216350 313 ntBASIC14.42□□□□□ -0.1
Rfx1P48377 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Gm10268-201ENSMUST00000085340 555 ntBASIC14.42□□□□□ -0.1
Rfx1P48377 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Rfx1P48377 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.42□□□□□ -0.1
Rfx1P48377 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rfx1P48377 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC14.42□□□□□ -0.1
Rfx1P48377 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.42□□□□□ -0.1
Rfx1P48377 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.42□□□□□ -0.1
Rfx1P48377 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Rfx1P48377 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx1P48377 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.41□□□□□ -0.1
Rfx1P48377 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.41□□□□□ -0.1
Rfx1P48377 Gm24830-201ENSMUST00000102024 166 ntBASIC14.41□□□□□ -0.1
Rfx1P48377 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rfx1P48377 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms