Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hmx3P42581 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hmx3P42581 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hmx3P42581 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hmx3P42581 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hmx3P42581 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hmx3P42581 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hmx3P42581 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Hmx3P42581 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hmx3P42581 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hmx3P42581 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.16□□□□□ -0.78
Hmx3P42581 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Gm21039-201ENSMUST00000223359 2012 ntBASIC10.16□□□□□ -0.78
Hmx3P42581 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hmx3P42581 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Hmx3P42581 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hmx3P42581 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hmx3P42581 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hmx3P42581 Gm11978-201ENSMUST00000122315 466 ntBASIC10.16□□□□□ -0.78
Hmx3P42581 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.16□□□□□ -0.78
Hmx3P42581 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.16□□□□□ -0.78
Hmx3P42581 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.16□□□□□ -0.78
Hmx3P42581 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.16□□□□□ -0.78
Hmx3P42581 Gm8463-201ENSMUST00000208573 613 ntBASIC10.16□□□□□ -0.78
Hmx3P42581 Gm45384-201ENSMUST00000210451 277 ntBASIC10.16□□□□□ -0.78
Hmx3P42581 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.16□□□□□ -0.78
Hmx3P42581 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.16□□□□□ -0.78
Hmx3P42581 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Hmx3P42581 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hmx3P42581 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hmx3P42581 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.16□□□□□ -0.78
Hmx3P42581 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmx3P42581 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.16□□□□□ -0.78
Hmx3P42581 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.16□□□□□ -0.78
Hmx3P42581 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.15□□□□□ -0.78
Hmx3P42581 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Hmx3P42581 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Hmx3P42581 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.15□□□□□ -0.78
Hmx3P42581 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Hmx3P42581 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.15□□□□□ -0.78
Hmx3P42581 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Hmx3P42581 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.15□□□□□ -0.78
Hmx3P42581 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.15□□□□□ -0.78
Hmx3P42581 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Hmx3P42581 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.15□□□□□ -0.78
Hmx3P42581 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.15□□□□□ -0.78
Hmx3P42581 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.15□□□□□ -0.78
Hmx3P42581 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.15□□□□□ -0.78
Hmx3P42581 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Hmx3P42581 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.15□□□□□ -0.78
Hmx3P42581 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.15□□□□□ -0.78
Hmx3P42581 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmx3P42581 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms