Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
TfamP40630 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
TfamP40630 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.73□□□□□ -0.53
TfamP40630 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TfamP40630 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
TfamP40630 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
TfamP40630 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
TfamP40630 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.72□□□□□ -0.53
TfamP40630 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.72□□□□□ -0.53
TfamP40630 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Gm24934-201ENSMUST00000103764 111 ntBASIC11.72□□□□□ -0.53
TfamP40630 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Gm6023-201ENSMUST00000118217 606 ntBASIC11.72□□□□□ -0.53
TfamP40630 Gm11425-201ENSMUST00000119608 498 ntBASIC11.72□□□□□ -0.53
TfamP40630 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.72□□□□□ -0.53
TfamP40630 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.72□□□□□ -0.53
TfamP40630 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.72□□□□□ -0.53
TfamP40630 Gm5370-201ENSMUST00000187187 574 ntBASIC11.72□□□□□ -0.53
TfamP40630 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
TfamP40630 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.72□□□□□ -0.53
TfamP40630 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.72□□□□□ -0.53
TfamP40630 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.72□□□□□ -0.53
TfamP40630 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Gm9396-201ENSMUST00000076703 567 ntBASIC11.72□□□□□ -0.53
TfamP40630 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.72□□□□□ -0.53
TfamP40630 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.72□□□□□ -0.53
TfamP40630 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
TfamP40630 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.72□□□□□ -0.53
TfamP40630 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
TfamP40630 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.72□□□□□ -0.53
TfamP40630 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.72□□□□□ -0.53
TfamP40630 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TfamP40630 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.72□□□□□ -0.53
TfamP40630 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
TfamP40630 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.71□□□□□ -0.53
TfamP40630 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.71□□□□□ -0.53
TfamP40630 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.71□□□□□ -0.53
TfamP40630 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
TfamP40630 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
TfamP40630 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.71□□□□□ -0.53
TfamP40630 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.71□□□□□ -0.53
TfamP40630 Gm10434-201ENSMUST00000101158 471 ntBASIC11.71□□□□□ -0.53
TfamP40630 Gm22018-201ENSMUST00000104357 131 ntBASIC11.71□□□□□ -0.53
TfamP40630 Gm23912-201ENSMUST00000104687 87 ntBASIC11.71□□□□□ -0.53
TfamP40630 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
TfamP40630 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Mir1247-201ENSMUST00000116706 82 ntBASIC11.71□□□□□ -0.53
TfamP40630 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.71□□□□□ -0.53
TfamP40630 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
TfamP40630 Mir1982-201ENSMUST00000157368 74 ntBASIC11.71□□□□□ -0.53
TfamP40630 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.71□□□□□ -0.53
TfamP40630 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.71□□□□□ -0.53
TfamP40630 Gm5745-201ENSMUST00000183748 313 ntBASIC11.71□□□□□ -0.53
TfamP40630 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.71□□□□□ -0.53
TfamP40630 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.71□□□□□ -0.53
TfamP40630 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.71□□□□□ -0.53
TfamP40630 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.71□□□□□ -0.53
TfamP40630 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TfamP40630 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 181.4 ms