Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
VhlP40338 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.94□□□□□ -0.82
VhlP40338 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.94□□□□□ -0.82
VhlP40338 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC9.94□□□□□ -0.82
VhlP40338 Gm17794-201ENSMUST00000220252 955 ntBASIC9.94□□□□□ -0.82
VhlP40338 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
VhlP40338 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
VhlP40338 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.94□□□□□ -0.82
VhlP40338 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.94□□□□□ -0.82
VhlP40338 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.94□□□□□ -0.82
VhlP40338 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.94□□□□□ -0.82
VhlP40338 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.94□□□□□ -0.82
VhlP40338 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VhlP40338 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.93□□□□□ -0.82
VhlP40338 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.93□□□□□ -0.82
VhlP40338 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
VhlP40338 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.93□□□□□ -0.82
VhlP40338 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.93□□□□□ -0.82
VhlP40338 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Gm3287-205ENSMUST00000228893 1332 ntBASIC9.93□□□□□ -0.82
VhlP40338 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
VhlP40338 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.93□□□□□ -0.82
VhlP40338 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.93□□□□□ -0.82
VhlP40338 Gm11478-201ENSMUST00000117851 599 ntBASIC9.93□□□□□ -0.82
VhlP40338 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.93□□□□□ -0.82
VhlP40338 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.93□□□□□ -0.82
VhlP40338 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC9.93□□□□□ -0.82
VhlP40338 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.93□□□□□ -0.82
VhlP40338 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.93□□□□□ -0.82
VhlP40338 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.93□□□□□ -0.82
VhlP40338 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC9.93□□□□□ -0.82
VhlP40338 Gm45384-201ENSMUST00000210451 277 ntBASIC9.93□□□□□ -0.82
VhlP40338 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.93□□□□□ -0.82
VhlP40338 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC9.93□□□□□ -0.82
VhlP40338 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC9.93□□□□□ -0.82
VhlP40338 Gm45925-201ENSMUST00000218882 744 ntBASIC9.93□□□□□ -0.82
VhlP40338 Gm5781-201ENSMUST00000219792 443 ntBASIC9.93□□□□□ -0.82
VhlP40338 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
VhlP40338 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
VhlP40338 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
VhlP40338 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
VhlP40338 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
VhlP40338 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.93□□□□□ -0.82
VhlP40338 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
VhlP40338 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
VhlP40338 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.92□□□□□ -0.82
VhlP40338 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms