Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd1P40201 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC17.74■□□□□ 0.43
Chd1P40201 Adra1a-206ENSMUST00000225182 2337 ntBASIC17.74■□□□□ 0.43
Chd1P40201 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC17.74■□□□□ 0.43
Chd1P40201 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC17.74■□□□□ 0.43
Chd1P40201 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd1P40201 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Chd1P40201 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC17.73■□□□□ 0.43
Chd1P40201 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC17.73■□□□□ 0.43
Chd1P40201 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC17.73■□□□□ 0.43
Chd1P40201 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC17.73■□□□□ 0.43
Chd1P40201 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Chd1P40201 Mir1941-201ENSMUST00000157834 83 ntBASIC17.73■□□□□ 0.43
Chd1P40201 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC17.73■□□□□ 0.43
Chd1P40201 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC17.73■□□□□ 0.43
Chd1P40201 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC17.73■□□□□ 0.43
Chd1P40201 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC17.73■□□□□ 0.43
Chd1P40201 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Chd1P40201 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Chd1P40201 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chd1P40201 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd1P40201 Gm11473-201ENSMUST00000118980 359 ntBASIC17.72■□□□□ 0.43
Chd1P40201 Gm12009-201ENSMUST00000121361 1100 ntBASIC17.72■□□□□ 0.43
Chd1P40201 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chd1P40201 Gm2474-201ENSMUST00000195162 559 ntBASIC17.72■□□□□ 0.43
Chd1P40201 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC17.72■□□□□ 0.43
Chd1P40201 AC107752.1-201ENSMUST00000219362 469 ntBASIC17.72■□□□□ 0.43
Chd1P40201 Gm25580-201ENSMUST00000083409 327 ntBASIC17.72■□□□□ 0.43
Chd1P40201 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd1P40201 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Chd1P40201 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC17.72■□□□□ 0.43
Chd1P40201 Gm5740-201ENSMUST00000211003 1857 ntBASIC17.72■□□□□ 0.43
Chd1P40201 AC241621.2-201ENSMUST00000223991 2151 ntBASIC17.72■□□□□ 0.43
Chd1P40201 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd1P40201 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd1P40201 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd1P40201 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd1P40201 Gm24933-201ENSMUST00000103762 110 ntBASIC17.72■□□□□ 0.43
Chd1P40201 Gm23252-201ENSMUST00000103776 110 ntBASIC17.72■□□□□ 0.43
Chd1P40201 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Chd1P40201 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chd1P40201 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd1P40201 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC17.72■□□□□ 0.43
Chd1P40201 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC17.72■□□□□ 0.43
Chd1P40201 Gm5529-201ENSMUST00000165691 891 ntBASIC17.72■□□□□ 0.43
Chd1P40201 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
Chd1P40201 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd1P40201 Gm26443-201ENSMUST00000179610 110 ntBASIC17.72■□□□□ 0.43
Chd1P40201 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC17.72■□□□□ 0.43
Chd1P40201 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chd1P40201 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chd1P40201 Gm42499-201ENSMUST00000196193 1412 ntBASIC17.72■□□□□ 0.43
Chd1P40201 AC124613.1-201ENSMUST00000198711 88 ntBASIC17.72■□□□□ 0.43
Chd1P40201 Gm30055-201ENSMUST00000203175 803 ntBASIC17.72■□□□□ 0.43
Chd1P40201 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC17.72■□□□□ 0.43
Chd1P40201 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC17.72■□□□□ 0.43
Chd1P40201 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Chd1P40201 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.72■□□□□ 0.43
Chd1P40201 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd1P40201 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd1P40201 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Chd1P40201 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Chd1P40201 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chd1P40201 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd1P40201 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.71■□□□□ 0.43
Chd1P40201 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Chd1P40201 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd1P40201 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC17.71■□□□□ 0.43
Chd1P40201 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd1P40201 Cd9-ps-201ENSMUST00000174687 650 ntBASIC17.71■□□□□ 0.43
Chd1P40201 Gm26119-201ENSMUST00000175601 104 ntBASIC17.71■□□□□ 0.43
Chd1P40201 Gm7572-201ENSMUST00000182616 766 ntBASIC17.71■□□□□ 0.43
Chd1P40201 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC17.71■□□□□ 0.43
Chd1P40201 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Chd1P40201 Gm44605-201ENSMUST00000206892 949 ntBASIC17.71■□□□□ 0.43
Chd1P40201 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Chd1P40201 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC17.71■□□□□ 0.43
Chd1P40201 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Chd1P40201 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chd1P40201 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Chd1P40201 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms