Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1bP25119 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1bP25119 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 AC107452.3-201ENSMUST00000228807 1308 ntBASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms