Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Gm15808-201ENSMUST00000119046 604 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Gm13297-201ENSMUST00000120205 934 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Gm14381-201ENSMUST00000122105 414 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.58□□□□□ -0.56
Lire1P11260 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.58□□□□□ -0.56
Lire1P11260 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lire1P11260 Gm25668-201ENSMUST00000157700 129 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lire1P11260 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lire1P11260 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lire1P11260 Gm37259-201ENSMUST00000193903 849 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Gm21769-201ENSMUST00000211922 111 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Gm7046-201ENSMUST00000221351 977 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Gm8227-201ENSMUST00000223306 571 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lire1P11260 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Lire1P11260 Gm24526-201ENSMUST00000082921 158 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lire1P11260 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lire1P11260 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lire1P11260 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lire1P11260 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lire1P11260 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lire1P11260 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Lire1P11260 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lire1P11260 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Lire1P11260 Gm4454-201ENSMUST00000190585 2578 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.58□□□□□ -0.56
Lire1P11260 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.58□□□□□ -0.56
Lire1P11260 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lire1P11260 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.57□□□□□ -0.56
Lire1P11260 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.57□□□□□ -0.56
Lire1P11260 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.57□□□□□ -0.56
Lire1P11260 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lire1P11260 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.57□□□□□ -0.56
Lire1P11260 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.57□□□□□ -0.56
Lire1P11260 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.57□□□□□ -0.56
Lire1P11260 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Lire1P11260 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.57□□□□□ -0.56
Lire1P11260 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lire1P11260 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.57□□□□□ -0.56
Lire1P11260 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Lire1P11260 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Lire1P11260 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Lire1P11260 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Lire1P11260 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Lire1P11260 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Lire1P11260 Gm24255-201ENSMUST00000104481 128 ntBASIC11.57□□□□□ -0.56
Lire1P11260 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.57□□□□□ -0.56
Lire1P11260 Gm6447-201ENSMUST00000118905 835 ntBASIC11.57□□□□□ -0.56
Lire1P11260 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lire1P11260 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Lire1P11260 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.57□□□□□ -0.56
Lire1P11260 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.57□□□□□ -0.56
Lire1P11260 Gm44069-201ENSMUST00000204898 506 ntBASIC11.57□□□□□ -0.56
Lire1P11260 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.57□□□□□ -0.56
Lire1P11260 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Lire1P11260 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Lire1P11260 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.57□□□□□ -0.56
Lire1P11260 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.57□□□□□ -0.56
Lire1P11260 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.57□□□□□ -0.56
Lire1P11260 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lire1P11260 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lire1P11260 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lire1P11260 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms