Protein–RNA interactions for Protein: P10820

Prf1, Perforin-1, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prf1P10820 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prf1P10820 Gm27627-201ENSMUST00000183644 150 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Gm29615-201ENSMUST00000185371 697 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Gm28224-201ENSMUST00000186078 697 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Gm29001-201ENSMUST00000186177 697 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Gm28292-201ENSMUST00000186593 697 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Gm28101-201ENSMUST00000187608 697 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Gm29076-201ENSMUST00000187689 697 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Gm28302-201ENSMUST00000187931 697 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Gm28646-201ENSMUST00000188220 697 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Gm28205-201ENSMUST00000189177 697 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Gm29032-201ENSMUST00000189797 697 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Gm28695-201ENSMUST00000190300 697 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Gm37448-201ENSMUST00000192795 697 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Gm8956-201ENSMUST00000203939 825 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prf1P10820 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prf1P10820 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prf1P10820 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prf1P10820 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prf1P10820 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.4□□□□□ -0.42
Prf1P10820 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prf1P10820 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prf1P10820 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Prf1P10820 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prf1P10820 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prf1P10820 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Prf1P10820 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.4□□□□□ -0.42
Prf1P10820 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Prf1P10820 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Prf1P10820 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Prf1P10820 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Prf1P10820 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Gm13045-201ENSMUST00000119019 712 ntBASIC12.39□□□□□ -0.43
Prf1P10820 Gm12029-201ENSMUST00000120073 832 ntBASIC12.39□□□□□ -0.43
Prf1P10820 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.39□□□□□ -0.43
Prf1P10820 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.39□□□□□ -0.43
Prf1P10820 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.39□□□□□ -0.43
Prf1P10820 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.39□□□□□ -0.43
Prf1P10820 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.39□□□□□ -0.43
Prf1P10820 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.39□□□□□ -0.43
Prf1P10820 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Prf1P10820 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.39□□□□□ -0.43
Prf1P10820 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.39□□□□□ -0.43
Prf1P10820 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Prf1P10820 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.39□□□□□ -0.43
Prf1P10820 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.39□□□□□ -0.43
Prf1P10820 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prf1P10820 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Prf1P10820 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.38□□□□□ -0.43
Prf1P10820 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.38□□□□□ -0.43
Prf1P10820 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Prf1P10820 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Prf1P10820 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Prf1P10820 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.38□□□□□ -0.43
Prf1P10820 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.38□□□□□ -0.43
Prf1P10820 Gm10051-201ENSMUST00000145209 414 ntBASIC12.38□□□□□ -0.43
Prf1P10820 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.38□□□□□ -0.43
Prf1P10820 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.38□□□□□ -0.43
Prf1P10820 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.38□□□□□ -0.43
Prf1P10820 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prf1P10820 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.38□□□□□ -0.43
Prf1P10820 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Prf1P10820 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms