Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Smim1P0C8K7 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Smim1P0C8K7 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Smim1P0C8K7 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Smim1P0C8K7 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC8.27□□□□□ -1.08
Smim1P0C8K7 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Smim1P0C8K7 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.08
Smim1P0C8K7 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Smim1P0C8K7 Gm10699-201ENSMUST00000098916 2130 ntBASIC8.27□□□□□ -1.08
Smim1P0C8K7 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Smim1P0C8K7 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Gm5884-201ENSMUST00000036712 1479 ntBASIC8.27□□□□□ -1.09
Smim1P0C8K7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC8.27□□□□□ -1.09
Smim1P0C8K7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Gm37660-201ENSMUST00000192754 1732 ntBASIC8.27□□□□□ -1.09
Smim1P0C8K7 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Gm14350-201ENSMUST00000116642 640 ntBASIC8.27□□□□□ -1.09
Smim1P0C8K7 Gm13326-201ENSMUST00000118730 1011 ntBASIC8.27□□□□□ -1.09
Smim1P0C8K7 Gm5863-201ENSMUST00000121760 1008 ntBASIC8.27□□□□□ -1.09
Smim1P0C8K7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Gm15376-201ENSMUST00000122258 783 ntBASIC8.27□□□□□ -1.09
Smim1P0C8K7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Gm17271-201ENSMUST00000165535 355 ntBASIC8.27□□□□□ -1.09
Smim1P0C8K7 Gm3436-201ENSMUST00000179930 840 ntBASIC8.27□□□□□ -1.09
Smim1P0C8K7 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Gm44069-201ENSMUST00000204898 506 ntBASIC8.27□□□□□ -1.09
Smim1P0C8K7 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC8.27□□□□□ -1.09
Smim1P0C8K7 AC154846.1-201ENSMUST00000226278 862 ntBASIC8.27□□□□□ -1.09
Smim1P0C8K7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Gm29358-202ENSMUST00000187941 3227 ntBASIC8.27□□□□□ -1.09
Smim1P0C8K7 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smim1P0C8K7 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Gm24589-201ENSMUST00000116692 94 ntBASIC8.26□□□□□ -1.09
Smim1P0C8K7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Rmrp-201ENSMUST00000157463 271 ntBASIC8.26□□□□□ -1.09
Smim1P0C8K7 Gm16296-201ENSMUST00000159905 325 ntBASIC8.26□□□□□ -1.09
Smim1P0C8K7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Smim1P0C8K7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms