Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
ApoeP08226 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
ApoeP08226 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.45□□□□□ -0.58
ApoeP08226 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.45□□□□□ -0.58
ApoeP08226 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.45□□□□□ -0.58
ApoeP08226 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
ApoeP08226 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.45□□□□□ -0.58
ApoeP08226 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.45□□□□□ -0.58
ApoeP08226 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.45□□□□□ -0.58
ApoeP08226 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Gm24196-201ENSMUST00000179161 110 ntBASIC11.45□□□□□ -0.58
ApoeP08226 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.45□□□□□ -0.58
ApoeP08226 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.45□□□□□ -0.58
ApoeP08226 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.45□□□□□ -0.58
ApoeP08226 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.45□□□□□ -0.58
ApoeP08226 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.45□□□□□ -0.58
ApoeP08226 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
ApoeP08226 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
ApoeP08226 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
ApoeP08226 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.44□□□□□ -0.58
ApoeP08226 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
ApoeP08226 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.44□□□□□ -0.58
ApoeP08226 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.44□□□□□ -0.58
ApoeP08226 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
ApoeP08226 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
ApoeP08226 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.44□□□□□ -0.58
ApoeP08226 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.44□□□□□ -0.58
ApoeP08226 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.44□□□□□ -0.58
ApoeP08226 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
ApoeP08226 Gm4271-201ENSMUST00000174444 973 ntBASIC11.44□□□□□ -0.58
ApoeP08226 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.44□□□□□ -0.58
ApoeP08226 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
ApoeP08226 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.44□□□□□ -0.58
ApoeP08226 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.44□□□□□ -0.58
ApoeP08226 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
ApoeP08226 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
ApoeP08226 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
ApoeP08226 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
ApoeP08226 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.44□□□□□ -0.58
ApoeP08226 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.44□□□□□ -0.58
ApoeP08226 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
ApoeP08226 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.44□□□□□ -0.58
ApoeP08226 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
ApoeP08226 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
ApoeP08226 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.44□□□□□ -0.58
ApoeP08226 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
ApoeP08226 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.43□□□□□ -0.58
ApoeP08226 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
ApoeP08226 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.43□□□□□ -0.58
ApoeP08226 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.43□□□□□ -0.58
ApoeP08226 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
ApoeP08226 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms