Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.52□□□□□ -0.41
PrnpP04925 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.52□□□□□ -0.41
PrnpP04925 Gm42518-201ENSMUST00000196277 938 ntBASIC12.52□□□□□ -0.41
PrnpP04925 Gm44506-201ENSMUST00000206278 965 ntBASIC12.52□□□□□ -0.41
PrnpP04925 Gm17931-201ENSMUST00000208132 634 ntBASIC12.52□□□□□ -0.41
PrnpP04925 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.52□□□□□ -0.41
PrnpP04925 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrnpP04925 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrnpP04925 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
PrnpP04925 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PrnpP04925 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
PrnpP04925 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
PrnpP04925 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrnpP04925 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrnpP04925 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrnpP04925 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
PrnpP04925 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.52□□□□□ -0.41
PrnpP04925 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrnpP04925 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrnpP04925 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
PrnpP04925 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
PrnpP04925 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrnpP04925 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PrnpP04925 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
PrnpP04925 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
PrnpP04925 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.51□□□□□ -0.41
PrnpP04925 Gm11836-201ENSMUST00000121022 441 ntBASIC12.51□□□□□ -0.41
PrnpP04925 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.51□□□□□ -0.41
PrnpP04925 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.51□□□□□ -0.41
PrnpP04925 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.51□□□□□ -0.41
PrnpP04925 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.51□□□□□ -0.41
PrnpP04925 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
PrnpP04925 Gm37905-201ENSMUST00000195310 341 ntBASIC12.51□□□□□ -0.41
PrnpP04925 Gm43852-201ENSMUST00000202098 917 ntBASIC12.51□□□□□ -0.41
PrnpP04925 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.51□□□□□ -0.41
PrnpP04925 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.51□□□□□ -0.41
PrnpP04925 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.51□□□□□ -0.41
PrnpP04925 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
PrnpP04925 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrnpP04925 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.5□□□□□ -0.41
PrnpP04925 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
PrnpP04925 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
PrnpP04925 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
PrnpP04925 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Gm22711-201ENSMUST00000116890 133 ntBASIC12.5□□□□□ -0.41
PrnpP04925 Gm13182-201ENSMUST00000122241 312 ntBASIC12.5□□□□□ -0.41
PrnpP04925 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.5□□□□□ -0.41
PrnpP04925 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.5□□□□□ -0.41
PrnpP04925 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
PrnpP04925 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.5□□□□□ -0.41
PrnpP04925 Gm12407-201ENSMUST00000180219 324 ntBASIC12.5□□□□□ -0.41
PrnpP04925 Gm8492-201ENSMUST00000182375 987 ntBASIC12.5□□□□□ -0.41
PrnpP04925 Mir6998-201ENSMUST00000183343 64 ntBASIC12.5□□□□□ -0.41
PrnpP04925 Gm43520-201ENSMUST00000197996 164 ntBASIC12.5□□□□□ -0.41
PrnpP04925 Gm6108-201ENSMUST00000208365 367 ntBASIC12.5□□□□□ -0.41
PrnpP04925 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.5□□□□□ -0.41
PrnpP04925 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.5□□□□□ -0.41
PrnpP04925 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.5□□□□□ -0.41
PrnpP04925 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.5□□□□□ -0.41
PrnpP04925 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
PrnpP04925 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms