Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hcn1O88704 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hcn1O88704 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.63□□□□□ -0.55
Hcn1O88704 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hcn1O88704 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hcn1O88704 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.63□□□□□ -0.55
Hcn1O88704 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hcn1O88704 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hcn1O88704 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.62□□□□□ -0.55
Hcn1O88704 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.62□□□□□ -0.55
Hcn1O88704 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.62□□□□□ -0.55
Hcn1O88704 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.62□□□□□ -0.55
Hcn1O88704 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Hcn1O88704 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hcn1O88704 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.62□□□□□ -0.55
Hcn1O88704 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.62□□□□□ -0.55
Hcn1O88704 Gm21769-201ENSMUST00000211922 111 ntBASIC11.62□□□□□ -0.55
Hcn1O88704 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.62□□□□□ -0.55
Hcn1O88704 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Hcn1O88704 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
Hcn1O88704 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.62□□□□□ -0.55
Hcn1O88704 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hcn1O88704 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.62□□□□□ -0.55
Hcn1O88704 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hcn1O88704 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hcn1O88704 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hcn1O88704 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.61□□□□□ -0.55
Hcn1O88704 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hcn1O88704 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hcn1O88704 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Hcn1O88704 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Gm11222-201ENSMUST00000119005 738 ntBASIC11.61□□□□□ -0.55
Hcn1O88704 Gm15703-201ENSMUST00000120250 880 ntBASIC11.61□□□□□ -0.55
Hcn1O88704 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Hcn1O88704 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.61□□□□□ -0.55
Hcn1O88704 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.61□□□□□ -0.55
Hcn1O88704 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Hcn1O88704 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Hcn1O88704 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hcn1O88704 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms