Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pdlim1O70400 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12□□□□□ -0.49
Pdlim1O70400 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12□□□□□ -0.49
Pdlim1O70400 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12□□□□□ -0.49
Pdlim1O70400 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12□□□□□ -0.49
Pdlim1O70400 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim1O70400 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Pdlim1O70400 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.99□□□□□ -0.49
Pdlim1O70400 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.99□□□□□ -0.49
Pdlim1O70400 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pdlim1O70400 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pdlim1O70400 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Gm5419-201ENSMUST00000119301 527 ntBASIC11.99□□□□□ -0.49
Pdlim1O70400 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.99□□□□□ -0.49
Pdlim1O70400 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.99□□□□□ -0.49
Pdlim1O70400 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pdlim1O70400 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.99□□□□□ -0.49
Pdlim1O70400 Gm43962-201ENSMUST00000203898 190 ntBASIC11.99□□□□□ -0.49
Pdlim1O70400 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.99□□□□□ -0.49
Pdlim1O70400 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.99□□□□□ -0.49
Pdlim1O70400 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.99□□□□□ -0.49
Pdlim1O70400 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.99□□□□□ -0.49
Pdlim1O70400 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pdlim1O70400 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.99□□□□□ -0.49
Pdlim1O70400 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pdlim1O70400 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pdlim1O70400 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.99□□□□□ -0.49
Pdlim1O70400 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pdlim1O70400 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.98□□□□□ -0.49
Pdlim1O70400 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Pdlim1O70400 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.98□□□□□ -0.49
Pdlim1O70400 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.98□□□□□ -0.49
Pdlim1O70400 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.98□□□□□ -0.49
Pdlim1O70400 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.98□□□□□ -0.49
Pdlim1O70400 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.98□□□□□ -0.49
Pdlim1O70400 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pdlim1O70400 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.98□□□□□ -0.49
Pdlim1O70400 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pdlim1O70400 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pdlim1O70400 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pdlim1O70400 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.97□□□□□ -0.49
Pdlim1O70400 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 350.9 ms