Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.23□□□□□ -0.61
Alx3O70137 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Gm14127-201ENSMUST00000117906 678 ntBASIC11.23□□□□□ -0.61
Alx3O70137 Gm12138-201ENSMUST00000122180 951 ntBASIC11.23□□□□□ -0.61
Alx3O70137 Gm12363-201ENSMUST00000122250 668 ntBASIC11.23□□□□□ -0.61
Alx3O70137 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Alx3O70137 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC11.23□□□□□ -0.61
Alx3O70137 Gm37213-201ENSMUST00000193077 586 ntBASIC11.23□□□□□ -0.61
Alx3O70137 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.23□□□□□ -0.61
Alx3O70137 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Alx3O70137 Gm5035-201ENSMUST00000215581 927 ntBASIC11.23□□□□□ -0.61
Alx3O70137 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC11.23□□□□□ -0.61
Alx3O70137 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Alx3O70137 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.23□□□□□ -0.61
Alx3O70137 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.23□□□□□ -0.61
Alx3O70137 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.23□□□□□ -0.61
Alx3O70137 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.23□□□□□ -0.61
Alx3O70137 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.23□□□□□ -0.61
Alx3O70137 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.23□□□□□ -0.61
Alx3O70137 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.23□□□□□ -0.61
Alx3O70137 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.23□□□□□ -0.61
Alx3O70137 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Alx3O70137 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.23□□□□□ -0.61
Alx3O70137 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Alx3O70137 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Alx3O70137 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Alx3O70137 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Alx3O70137 Gm13313-201ENSMUST00000118938 1084 ntBASIC11.22□□□□□ -0.61
Alx3O70137 Gm12601-201ENSMUST00000118994 846 ntBASIC11.22□□□□□ -0.61
Alx3O70137 Gm13492-201ENSMUST00000119772 665 ntBASIC11.22□□□□□ -0.61
Alx3O70137 Gm11424-201ENSMUST00000121929 829 ntBASIC11.22□□□□□ -0.61
Alx3O70137 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
Alx3O70137 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.22□□□□□ -0.61
Alx3O70137 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Alx3O70137 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Alx3O70137 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.22□□□□□ -0.61
Alx3O70137 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.22□□□□□ -0.61
Alx3O70137 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.22□□□□□ -0.61
Alx3O70137 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.22□□□□□ -0.61
Alx3O70137 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.22□□□□□ -0.61
Alx3O70137 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 AC154838.2-201ENSMUST00000226602 747 ntBASIC11.22□□□□□ -0.61
Alx3O70137 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Alx3O70137 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Alx3O70137 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms