Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trdmt1O55055 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trdmt1O55055 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.31□□□□□ -0.28
Trdmt1O55055 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.31□□□□□ -0.28
Trdmt1O55055 Gm8492-201ENSMUST00000182375 987 ntBASIC13.31□□□□□ -0.28
Trdmt1O55055 Mir6998-201ENSMUST00000183343 64 ntBASIC13.31□□□□□ -0.28
Trdmt1O55055 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.31□□□□□ -0.28
Trdmt1O55055 Gm44506-201ENSMUST00000206278 965 ntBASIC13.31□□□□□ -0.28
Trdmt1O55055 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trdmt1O55055 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.31□□□□□ -0.28
Trdmt1O55055 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.31□□□□□ -0.28
Trdmt1O55055 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.31□□□□□ -0.28
Trdmt1O55055 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.31□□□□□ -0.28
Trdmt1O55055 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trdmt1O55055 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdmt1O55055 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trdmt1O55055 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.3□□□□□ -0.28
Trdmt1O55055 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Gm11675-201ENSMUST00000121873 832 ntBASIC13.3□□□□□ -0.28
Trdmt1O55055 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trdmt1O55055 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.3□□□□□ -0.28
Trdmt1O55055 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trdmt1O55055 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.3□□□□□ -0.28
Trdmt1O55055 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.3□□□□□ -0.28
Trdmt1O55055 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.3□□□□□ -0.28
Trdmt1O55055 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trdmt1O55055 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.3□□□□□ -0.28
Trdmt1O55055 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.3□□□□□ -0.28
Trdmt1O55055 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.3□□□□□ -0.28
Trdmt1O55055 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.3□□□□□ -0.28
Trdmt1O55055 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trdmt1O55055 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trdmt1O55055 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trdmt1O55055 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.3□□□□□ -0.28
Trdmt1O55055 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.3□□□□□ -0.28
Trdmt1O55055 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdmt1O55055 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trdmt1O55055 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trdmt1O55055 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trdmt1O55055 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Gm16166-201ENSMUST00000118291 787 ntBASIC13.29□□□□□ -0.28
Trdmt1O55055 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.29□□□□□ -0.28
Trdmt1O55055 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.29□□□□□ -0.28
Trdmt1O55055 Mir1956-201ENSMUST00000157748 65 ntBASIC13.29□□□□□ -0.28
Trdmt1O55055 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trdmt1O55055 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trdmt1O55055 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.29□□□□□ -0.28
Trdmt1O55055 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms