Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm25881-201ENSMUST00000157783 103 ntBASIC12.47□□□□□ -0.41
Sdc4O35988 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.47□□□□□ -0.41
Sdc4O35988 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.47□□□□□ -0.41
Sdc4O35988 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.47□□□□□ -0.41
Sdc4O35988 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Sdc4O35988 Spcs1-203ENSMUST00000226374 592 ntBASIC12.47□□□□□ -0.41
Sdc4O35988 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.47□□□□□ -0.41
Sdc4O35988 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Sdc4O35988 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.47□□□□□ -0.41
Sdc4O35988 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Sdc4O35988 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc4O35988 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.47□□□□□ -0.41
Sdc4O35988 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Sdc4O35988 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sdc4O35988 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sdc4O35988 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sdc4O35988 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Gm14058-201ENSMUST00000116082 735 ntBASIC12.46□□□□□ -0.41
Sdc4O35988 Gm13035-201ENSMUST00000117496 342 ntBASIC12.46□□□□□ -0.41
Sdc4O35988 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.46□□□□□ -0.41
Sdc4O35988 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.46□□□□□ -0.41
Sdc4O35988 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.46□□□□□ -0.41
Sdc4O35988 Gm22902-201ENSMUST00000158488 302 ntBASIC12.46□□□□□ -0.41
Sdc4O35988 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.46□□□□□ -0.41
Sdc4O35988 Gm3786-201ENSMUST00000202659 378 ntBASIC12.46□□□□□ -0.41
Sdc4O35988 Gm44124-201ENSMUST00000204159 472 ntBASIC12.46□□□□□ -0.41
Sdc4O35988 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc4O35988 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sdc4O35988 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sdc4O35988 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sdc4O35988 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sdc4O35988 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sdc4O35988 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sdc4O35988 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sdc4O35988 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.46□□□□□ -0.42
Sdc4O35988 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sdc4O35988 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.46□□□□□ -0.42
Sdc4O35988 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sdc4O35988 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sdc4O35988 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sdc4O35988 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sdc4O35988 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sdc4O35988 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Sdc4O35988 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.45□□□□□ -0.42
Sdc4O35988 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sdc4O35988 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sdc4O35988 Gm15515-201ENSMUST00000117827 822 ntBASIC12.45□□□□□ -0.42
Sdc4O35988 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.45□□□□□ -0.42
Sdc4O35988 Gm12164-201ENSMUST00000121695 551 ntBASIC12.45□□□□□ -0.42
Sdc4O35988 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.45□□□□□ -0.42
Sdc4O35988 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.45□□□□□ -0.42
Sdc4O35988 Gm3332-201ENSMUST00000189337 928 ntBASIC12.45□□□□□ -0.42
Sdc4O35988 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Sdc4O35988 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Sdc4O35988 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.45□□□□□ -0.42
Sdc4O35988 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.45□□□□□ -0.42
Sdc4O35988 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sdc4O35988 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.45□□□□□ -0.42
Sdc4O35988 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc4O35988 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sdc4O35988 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.45□□□□□ -0.42
Sdc4O35988 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms