Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.84□□□□□ -0.51
Npc1O35604 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npc1O35604 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npc1O35604 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npc1O35604 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Npc1O35604 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npc1O35604 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npc1O35604 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npc1O35604 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Npc1O35604 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Npc1O35604 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.84□□□□□ -0.51
Npc1O35604 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Npc1O35604 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Npc1O35604 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npc1O35604 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Npc1O35604 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Npc1O35604 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.83□□□□□ -0.51
Npc1O35604 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Npc1O35604 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.83□□□□□ -0.52
Npc1O35604 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.83□□□□□ -0.52
Npc1O35604 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Npc1O35604 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.83□□□□□ -0.52
Npc1O35604 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Npc1O35604 Gm25700-201ENSMUST00000177693 110 ntBASIC11.83□□□□□ -0.52
Npc1O35604 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Npc1O35604 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.83□□□□□ -0.52
Npc1O35604 Gm45186-201ENSMUST00000206874 478 ntBASIC11.83□□□□□ -0.52
Npc1O35604 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.83□□□□□ -0.52
Npc1O35604 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.83□□□□□ -0.52
Npc1O35604 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.83□□□□□ -0.52
Npc1O35604 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.83□□□□□ -0.52
Npc1O35604 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.83□□□□□ -0.52
Npc1O35604 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Npc1O35604 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Npc1O35604 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Npc1O35604 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npc1O35604 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Npc1O35604 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Npc1O35604 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Npc1O35604 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Npc1O35604 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Gm23912-201ENSMUST00000104687 87 ntBASIC11.82□□□□□ -0.52
Npc1O35604 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Npc1O35604 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.82□□□□□ -0.52
Npc1O35604 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.82□□□□□ -0.52
Npc1O35604 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.82□□□□□ -0.52
Npc1O35604 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Gm2260-201ENSMUST00000184965 657 ntBASIC11.82□□□□□ -0.52
Npc1O35604 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.82□□□□□ -0.52
Npc1O35604 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.82□□□□□ -0.52
Npc1O35604 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.82□□□□□ -0.52
Npc1O35604 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.82□□□□□ -0.52
Npc1O35604 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.82□□□□□ -0.52
Npc1O35604 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Npc1O35604 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Npc1O35604 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Map1b-203ENSMUST00000223725 2669 ntBASIC11.82□□□□□ -0.52
Npc1O35604 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npc1O35604 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Npc1O35604 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Npc1O35604 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms