Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.56□□□□□ -0.72
Atf6bO35451 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.56□□□□□ -0.72
Atf6bO35451 Gm13570-201ENSMUST00000140763 309 ntBASIC10.56□□□□□ -0.72
Atf6bO35451 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Atf6bO35451 Gm20482-202ENSMUST00000174729 825 ntBASIC10.56□□□□□ -0.72
Atf6bO35451 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.56□□□□□ -0.72
Atf6bO35451 Gm37259-201ENSMUST00000193903 849 ntBASIC10.56□□□□□ -0.72
Atf6bO35451 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.56□□□□□ -0.72
Atf6bO35451 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.56□□□□□ -0.72
Atf6bO35451 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.56□□□□□ -0.72
Atf6bO35451 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Atf6bO35451 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Atf6bO35451 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.56□□□□□ -0.72
Atf6bO35451 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.56□□□□□ -0.72
Atf6bO35451 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.56□□□□□ -0.72
Atf6bO35451 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.56□□□□□ -0.72
Atf6bO35451 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Atf6bO35451 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.56□□□□□ -0.72
Atf6bO35451 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.56□□□□□ -0.72
Atf6bO35451 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Atf6bO35451 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.56□□□□□ -0.72
Atf6bO35451 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atf6bO35451 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Atf6bO35451 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Atf6bO35451 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.55□□□□□ -0.72
Atf6bO35451 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.55□□□□□ -0.72
Atf6bO35451 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Gm23270-201ENSMUST00000104055 131 ntBASIC10.55□□□□□ -0.72
Atf6bO35451 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.55□□□□□ -0.72
Atf6bO35451 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.55□□□□□ -0.72
Atf6bO35451 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.55□□□□□ -0.72
Atf6bO35451 Gm9022-201ENSMUST00000182482 992 ntBASIC10.55□□□□□ -0.72
Atf6bO35451 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.55□□□□□ -0.72
Atf6bO35451 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.55□□□□□ -0.72
Atf6bO35451 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.55□□□□□ -0.72
Atf6bO35451 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Atf6bO35451 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Atf6bO35451 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Atf6bO35451 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Atf6bO35451 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.55□□□□□ -0.72
Atf6bO35451 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.55□□□□□ -0.72
Atf6bO35451 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.55□□□□□ -0.72
Atf6bO35451 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.55□□□□□ -0.72
Atf6bO35451 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Atf6bO35451 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Atf6bO35451 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.55□□□□□ -0.72
Atf6bO35451 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.55□□□□□ -0.72
Atf6bO35451 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.55□□□□□ -0.72
Atf6bO35451 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atf6bO35451 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Atf6bO35451 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atf6bO35451 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atf6bO35451 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atf6bO35451 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atf6bO35451 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Atf6bO35451 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms