Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm38241-201ENSMUST00000192641 898 ntBASIC10.81□□□□□ -0.68
Alx4O35137 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.81□□□□□ -0.68
Alx4O35137 Gm7561-201ENSMUST00000211203 886 ntBASIC10.81□□□□□ -0.68
Alx4O35137 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.81□□□□□ -0.68
Alx4O35137 Gm39404-201ENSMUST00000216350 313 ntBASIC10.81□□□□□ -0.68
Alx4O35137 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Alx4O35137 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Alx4O35137 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.81□□□□□ -0.68
Alx4O35137 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Alx4O35137 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.81□□□□□ -0.68
Alx4O35137 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.81□□□□□ -0.68
Alx4O35137 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.8□□□□□ -0.68
Alx4O35137 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.8□□□□□ -0.68
Alx4O35137 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Alx4O35137 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Alx4O35137 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Alx4O35137 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Gm8420-201ENSMUST00000097103 598 ntBASIC10.8□□□□□ -0.68
Alx4O35137 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Alx4O35137 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Alx4O35137 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Alx4O35137 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.8□□□□□ -0.68
Alx4O35137 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Alx4O35137 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.8□□□□□ -0.68
Alx4O35137 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
Alx4O35137 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.79□□□□□ -0.68
Alx4O35137 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Alx4O35137 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Gm24934-201ENSMUST00000103764 111 ntBASIC10.79□□□□□ -0.68
Alx4O35137 Gm14247-201ENSMUST00000120950 237 ntBASIC10.79□□□□□ -0.68
Alx4O35137 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Alx4O35137 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.79□□□□□ -0.68
Alx4O35137 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.79□□□□□ -0.68
Alx4O35137 Gm8738-201ENSMUST00000172606 329 ntBASIC10.79□□□□□ -0.68
Alx4O35137 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms