Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Polr1aO35134 Acot6-202ENSMUST00000222921 3622 ntBASIC18.28■□□□□ 0.52
Polr1aO35134 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Polr1aO35134 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Polr1aO35134 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC18.28■□□□□ 0.52
Polr1aO35134 Gm14270-201ENSMUST00000118388 846 ntBASIC18.28■□□□□ 0.52
Polr1aO35134 Gm18201-201ENSMUST00000174735 875 ntBASIC18.28■□□□□ 0.52
Polr1aO35134 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Polr1aO35134 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr1aO35134 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Polr1aO35134 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Polr1aO35134 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Polr1aO35134 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Polr1aO35134 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Polr1aO35134 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC18.27■□□□□ 0.52
Polr1aO35134 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Polr1aO35134 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Polr1aO35134 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Polr1aO35134 Gm12179-201ENSMUST00000118344 1272 ntBASIC18.27■□□□□ 0.52
Polr1aO35134 Gm7541-201ENSMUST00000118361 535 ntBASIC18.27■□□□□ 0.52
Polr1aO35134 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Polr1aO35134 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC18.27■□□□□ 0.52
Polr1aO35134 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC18.27■□□□□ 0.52
Polr1aO35134 Gm25554-201ENSMUST00000158075 113 ntBASIC18.27■□□□□ 0.52
Polr1aO35134 Gm19046-201ENSMUST00000221263 1298 ntBASIC18.27■□□□□ 0.52
Polr1aO35134 AC153152.3-201ENSMUST00000222188 1135 ntBASIC18.27■□□□□ 0.52
Polr1aO35134 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Polr1aO35134 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Polr1aO35134 Gm8146-201ENSMUST00000192106 1847 ntBASIC18.27■□□□□ 0.52
Polr1aO35134 AC138329.2-201ENSMUST00000225579 1842 ntBASIC18.27■□□□□ 0.52
Polr1aO35134 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Polr1aO35134 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Polr1aO35134 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Polr1aO35134 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Polr1aO35134 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC18.27■□□□□ 0.51
Polr1aO35134 Gm44190-201ENSMUST00000205083 1401 ntBASIC18.27■□□□□ 0.51
Polr1aO35134 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Polr1aO35134 Gm12783-201ENSMUST00000121425 397 ntBASIC18.26■□□□□ 0.51
Polr1aO35134 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC18.26■□□□□ 0.51
Polr1aO35134 Gm35713-201ENSMUST00000210516 199 ntBASIC18.26■□□□□ 0.51
Polr1aO35134 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC18.26■□□□□ 0.51
Polr1aO35134 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Polr1aO35134 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC18.26■□□□□ 0.51
Polr1aO35134 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Polr1aO35134 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Polr1aO35134 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Polr1aO35134 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Polr1aO35134 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Polr1aO35134 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Polr1aO35134 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Polr1aO35134 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC18.26■□□□□ 0.51
Polr1aO35134 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Polr1aO35134 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Polr1aO35134 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Polr1aO35134 Gm22379-201ENSMUST00000157480 131 ntBASIC18.26■□□□□ 0.51
Polr1aO35134 Mir7051-201ENSMUST00000184167 73 ntBASIC18.26■□□□□ 0.51
Polr1aO35134 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC18.26■□□□□ 0.51
Polr1aO35134 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Polr1aO35134 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Polr1aO35134 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Polr1aO35134 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Polr1aO35134 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Polr1aO35134 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Polr1aO35134 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Polr1aO35134 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Polr1aO35134 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC18.25■□□□□ 0.51
Polr1aO35134 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Polr1aO35134 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Polr1aO35134 Gm27196-201ENSMUST00000184787 2582 ntBASIC18.25■□□□□ 0.51
Polr1aO35134 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Polr1aO35134 Gm12218-201ENSMUST00000117666 399 ntBASIC18.25■□□□□ 0.51
Polr1aO35134 Gm16219-201ENSMUST00000120096 274 ntBASIC18.25■□□□□ 0.51
Polr1aO35134 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Polr1aO35134 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Polr1aO35134 Gm43671-201ENSMUST00000200422 433 ntBASIC18.25■□□□□ 0.51
Polr1aO35134 Gm5468-202ENSMUST00000227851 682 ntBASIC18.25■□□□□ 0.51
Polr1aO35134 n-R5s185-201ENSMUST00000083953 119 ntBASIC18.25■□□□□ 0.51
Polr1aO35134 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Polr1aO35134 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Polr1aO35134 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Polr1aO35134 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Polr1aO35134 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Polr1aO35134 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Polr1aO35134 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Polr1aO35134 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC18.24■□□□□ 0.51
Polr1aO35134 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms