Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Rprl1-201ENSMUST00000158050 327 ntBASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Gm25043-201ENSMUST00000158604 212 ntBASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Gm2546-201ENSMUST00000182630 991 ntBASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Gm27572-201ENSMUST00000183702 255 ntBASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh9F8VPK8 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdh9F8VPK8 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdh9F8VPK8 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Gm10434-201ENSMUST00000101158 471 ntBASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh9F8VPK8 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Gm13392-201ENSMUST00000117708 150 ntBASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Gm14832-201ENSMUST00000121289 322 ntBASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms