Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Gm6441-201ENSMUST00000120983 696 ntBASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Mir7011-201ENSMUST00000183768 73 ntBASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 AC101205.2-201ENSMUST00000226206 715 ntBASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Gm44605-201ENSMUST00000206892 949 ntBASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 AC134607.1-201ENSMUST00000214707 485 ntBASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Zkscan7-205ENSMUST00000216462 990 ntBASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a3E9PWQ3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Gm10807-201ENSMUST00000177134 795 ntBASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Gm7928-201ENSMUST00000181249 701 ntBASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Gm18555-201ENSMUST00000197935 584 ntBASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Gm2553-201ENSMUST00000215986 605 ntBASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Gm6378-201ENSMUST00000084199 444 ntBASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.71□□□□□ -0.54
Col6a3E9PWQ3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Gm13422-201ENSMUST00000118834 504 ntBASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Gm13377-201ENSMUST00000137984 683 ntBASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Gm43564-201ENSMUST00000196185 211 ntBASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms