Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Gm12036-201ENSMUST00000120008 530 ntBASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Gm9136-201ENSMUST00000193368 454 ntBASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Gm43184-201ENSMUST00000197247 542 ntBASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Gm7848-201ENSMUST00000210739 718 ntBASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Clca3bE9PUL3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Clca3bE9PUL3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13□□□□□ -0.33
Clca3bE9PUL3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13□□□□□ -0.33
Clca3bE9PUL3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13□□□□□ -0.33
Clca3bE9PUL3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Gm12857-201ENSMUST00000117678 592 ntBASIC13□□□□□ -0.33
Clca3bE9PUL3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13□□□□□ -0.33
Clca3bE9PUL3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13□□□□□ -0.33
Clca3bE9PUL3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13□□□□□ -0.33
Clca3bE9PUL3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Clca3bE9PUL3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13□□□□□ -0.33
Clca3bE9PUL3 Gm19208-201ENSMUST00000213861 912 ntBASIC13□□□□□ -0.33
Clca3bE9PUL3 Gm807-202ENSMUST00000224929 408 ntBASIC13□□□□□ -0.33
Clca3bE9PUL3 AC133602.1-201ENSMUST00000227510 509 ntBASIC13□□□□□ -0.33
Clca3bE9PUL3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13□□□□□ -0.33
Clca3bE9PUL3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Gm44831-201ENSMUST00000208469 2989 ntBASIC13□□□□□ -0.33
Clca3bE9PUL3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13□□□□□ -0.33
Clca3bE9PUL3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Clca3bE9PUL3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Gm12196-201ENSMUST00000120954 262 ntBASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Gm11450-201ENSMUST00000121144 333 ntBASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Gm25881-201ENSMUST00000157783 103 ntBASIC12.99□□□□□ -0.33
Clca3bE9PUL3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clca3bE9PUL3 Gm5369-201ENSMUST00000217499 588 ntBASIC12.99□□□□□ -0.33
Clca3bE9PUL3 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.99□□□□□ -0.33
Clca3bE9PUL3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms