Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrn3B2RS91 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm23912-201ENSMUST00000104687 87 ntBASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm14644-201ENSMUST00000116671 647 ntBASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm13296-201ENSMUST00000117854 997 ntBASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.22□□□□□ -0.45
Rrn3B2RS91 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm6963-201ENSMUST00000147879 379 ntBASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm32999-201ENSMUST00000192693 562 ntBASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm44124-201ENSMUST00000204159 472 ntBASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm44967-201ENSMUST00000207047 631 ntBASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.22□□□□□ -0.45
Rrn3B2RS91 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.22□□□□□ -0.45
Rrn3B2RS91 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.22□□□□□ -0.45
Rrn3B2RS91 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrn3B2RS91 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.21□□□□□ -0.45
Rrn3B2RS91 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.21□□□□□ -0.45
Rrn3B2RS91 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.21□□□□□ -0.45
Rrn3B2RS91 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Gm5070-201ENSMUST00000177599 862 ntBASIC12.21□□□□□ -0.45
Rrn3B2RS91 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Gm44882-201ENSMUST00000205702 802 ntBASIC12.21□□□□□ -0.45
Rrn3B2RS91 Gm45598-202ENSMUST00000210719 986 ntBASIC12.21□□□□□ -0.45
Rrn3B2RS91 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.21□□□□□ -0.45
Rrn3B2RS91 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.21□□□□□ -0.45
Rrn3B2RS91 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.21□□□□□ -0.45
Rrn3B2RS91 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.21□□□□□ -0.45
Rrn3B2RS91 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.21□□□□□ -0.45
Rrn3B2RS91 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.21□□□□□ -0.45
Rrn3B2RS91 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms