Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn7aB1AYL1 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn7aB1AYL1 Gm5308-201ENSMUST00000196752 1354 ntBASIC15.25■□□□□ 0.03
Scn7aB1AYL1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Gm18201-201ENSMUST00000174735 875 ntBASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 AC158392.3-201ENSMUST00000224271 1284 ntBASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Scn7aB1AYL1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 AC122891.1-201ENSMUST00000218671 268 ntBASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Gm4604-201ENSMUST00000025040 390 ntBASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn7aB1AYL1 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gm13022-201ENSMUST00000121181 285 ntBASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gm17070-201ENSMUST00000170463 784 ntBASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gm24809-201ENSMUST00000175318 271 ntBASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gm29067-201ENSMUST00000190821 470 ntBASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 AC124457.1-201ENSMUST00000198845 120 ntBASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Mt1-202ENSMUST00000211807 1085 ntBASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gm5468-202ENSMUST00000227851 682 ntBASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn7aB1AYL1 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms