Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Rce1-203ENSMUST00000224707 1255 ntBASIC9.74□□□□□ -0.85
Chd6A3KFM7 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gm5705-201ENSMUST00000066241 711 ntBASIC9.74□□□□□ -0.85
Chd6A3KFM7 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd6A3KFM7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Gm25562-201ENSMUST00000104608 133 ntBASIC9.73□□□□□ -0.85
Chd6A3KFM7 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 AC115304.2-201ENSMUST00000226399 332 ntBASIC9.73□□□□□ -0.85
Chd6A3KFM7 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.73□□□□□ -0.85
Chd6A3KFM7 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.73□□□□□ -0.85
Chd6A3KFM7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.73□□□□□ -0.85
Chd6A3KFM7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Gm12009-201ENSMUST00000121361 1100 ntBASIC9.73□□□□□ -0.85
Chd6A3KFM7 Gm22344-201ENSMUST00000122642 278 ntBASIC9.73□□□□□ -0.85
Chd6A3KFM7 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Gm16184-201ENSMUST00000162324 573 ntBASIC9.73□□□□□ -0.85
Chd6A3KFM7 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 AC124356.1-201ENSMUST00000221469 698 ntBASIC9.73□□□□□ -0.85
Chd6A3KFM7 AC129217.1-201ENSMUST00000225181 642 ntBASIC9.73□□□□□ -0.85
Chd6A3KFM7 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd6A3KFM7 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Chd6A3KFM7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.72□□□□□ -0.85
Chd6A3KFM7 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Gm23432-201ENSMUST00000157181 131 ntBASIC9.72□□□□□ -0.85
Chd6A3KFM7 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.72□□□□□ -0.85
Chd6A3KFM7 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Gm43677-201ENSMUST00000198098 2378 ntBASIC9.72□□□□□ -0.85
Chd6A3KFM7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms