Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.62□□□□□ -0.39
Scn1aA2APX8 Gm15004-201ENSMUST00000119192 630 ntBASIC12.62□□□□□ -0.39
Scn1aA2APX8 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Gm17391-201ENSMUST00000171036 126 ntBASIC12.61□□□□□ -0.39
Scn1aA2APX8 Gm6450-201ENSMUST00000200896 574 ntBASIC12.61□□□□□ -0.39
Scn1aA2APX8 Gm6905-201ENSMUST00000205729 511 ntBASIC12.61□□□□□ -0.39
Scn1aA2APX8 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.61□□□□□ -0.39
Scn1aA2APX8 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.61□□□□□ -0.39
Scn1aA2APX8 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.61□□□□□ -0.39
Scn1aA2APX8 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Gm23251-201ENSMUST00000103773 110 ntBASIC12.61□□□□□ -0.39
Scn1aA2APX8 Gm22711-201ENSMUST00000116890 133 ntBASIC12.61□□□□□ -0.39
Scn1aA2APX8 Gm13461-201ENSMUST00000120980 662 ntBASIC12.61□□□□□ -0.39
Scn1aA2APX8 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.61□□□□□ -0.39
Scn1aA2APX8 Gm37835-201ENSMUST00000193305 361 ntBASIC12.61□□□□□ -0.39
Scn1aA2APX8 Gm19287-201ENSMUST00000203190 358 ntBASIC12.61□□□□□ -0.39
Scn1aA2APX8 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.61□□□□□ -0.39
Scn1aA2APX8 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1aA2APX8 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Matn2-203ENSMUST00000226766 3252 ntBASIC12.6□□□□□ -0.39
Scn1aA2APX8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.6□□□□□ -0.39
Scn1aA2APX8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms