Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Gm23270-201ENSMUST00000104055 131 ntBASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Gm3096-201ENSMUST00000185770 364 ntBASIC12.11□□□□□ -0.47
H2afb2S4R1M3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Gm21769-201ENSMUST00000211922 111 ntBASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
H2afb2S4R1M3 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms