Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Cdh20Q9Z0M3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Cdh20Q9Z0M3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh20Q9Z0M3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh20Q9Z0M3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh20Q9Z0M3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh20Q9Z0M3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh20Q9Z0M3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh20Q9Z0M3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh20Q9Z0M3 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.21□□□□□ -0.62
Cdh20Q9Z0M3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh20Q9Z0M3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh20Q9Z0M3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Cdh20Q9Z0M3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh20Q9Z0M3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh20Q9Z0M3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cdh20Q9Z0M3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh20Q9Z0M3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cdh20Q9Z0M3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh20Q9Z0M3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh20Q9Z0M3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Gm15547-201ENSMUST00000122152 333 ntBASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Gm6621-201ENSMUST00000193251 772 ntBASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 Gm8712-201ENSMUST00000221090 701 ntBASIC11.2□□□□□ -0.62
Cdh20Q9Z0M3 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms