Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClcnkaQ9WUB7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ClcnkaQ9WUB7 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Gm42937-201ENSMUST00000197360 752 ntBASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClcnkaQ9WUB7 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm25214-201ENSMUST00000104573 129 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm2991-201ENSMUST00000173338 480 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm28882-201ENSMUST00000185504 314 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm6621-201ENSMUST00000193251 772 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm44882-201ENSMUST00000205702 802 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm6334-201ENSMUST00000207083 228 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms