Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm5733-201ENSMUST00000190232 939 ntBASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Gm6905-201ENSMUST00000205729 511 ntBASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Gm12419-201ENSMUST00000116649 636 ntBASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Gm13916-201ENSMUST00000117368 628 ntBASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Gm44126-201ENSMUST00000204831 514 ntBASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn8aQ9WTU3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Gm22144-201ENSMUST00000157402 102 ntBASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Gm24844-201ENSMUST00000158679 127 ntBASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Gm45113-201ENSMUST00000207518 165 ntBASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn8aQ9WTU3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Mir5132-201ENSMUST00000175166 71 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms