Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco4Q9JIS3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Rims2-204ENSMUST00000226410 3685 ntBASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Gm5566-201ENSMUST00000116118 459 ntBASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Gm15393-201ENSMUST00000120499 219 ntBASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Gm9824-201ENSMUST00000178707 561 ntBASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Gm10819-201ENSMUST00000099988 561 ntBASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco4Q9JIS3 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.65□□□□□ -0.86
Smco4Q9JIS3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Gm14140-201ENSMUST00000119999 995 ntBASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 AC174742.1-201ENSMUST00000218272 304 ntBASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Smco4Q9JIS3 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.65□□□□□ -0.86
Smco4Q9JIS3 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms