Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chmp4bQ9D8B3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Gm14644-201ENSMUST00000116671 647 ntBASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Gm11930-201ENSMUST00000117788 190 ntBASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4bQ9D8B3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Gm13722-201ENSMUST00000117964 3066 ntBASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4bQ9D8B3 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4bQ9D8B3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4bQ9D8B3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Chmp4bQ9D8B3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4bQ9D8B3 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4bQ9D8B3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4bQ9D8B3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4bQ9D8B3 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC15.27■□□□□ 0.03
Chmp4bQ9D8B3 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Chmp4bQ9D8B3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4bQ9D8B3 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4bQ9D8B3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Gm8712-201ENSMUST00000221090 701 ntBASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms