Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC15.92■□□□□ 0.14
U2af1Q9D883 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
U2af1Q9D883 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
U2af1Q9D883 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
U2af1Q9D883 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC15.91■□□□□ 0.14
U2af1Q9D883 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
U2af1Q9D883 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
U2af1Q9D883 Mir5120-201ENSMUST00000175020 78 ntBASIC15.91■□□□□ 0.14
U2af1Q9D883 Mir5132-201ENSMUST00000175166 71 ntBASIC15.91■□□□□ 0.14
U2af1Q9D883 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.91■□□□□ 0.14
U2af1Q9D883 Gm270-201ENSMUST00000223010 976 ntBASIC15.91■□□□□ 0.14
U2af1Q9D883 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
U2af1Q9D883 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Ptprm-203ENSMUST00000224091 3773 ntBASIC15.91■□□□□ 0.14
U2af1Q9D883 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
U2af1Q9D883 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 AC173482.6-201ENSMUST00000225889 1741 ntBASIC15.91■□□□□ 0.14
U2af1Q9D883 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
U2af1Q9D883 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
U2af1Q9D883 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
U2af1Q9D883 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
U2af1Q9D883 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
U2af1Q9D883 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
U2af1Q9D883 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
U2af1Q9D883 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
U2af1Q9D883 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
U2af1Q9D883 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
U2af1Q9D883 Map1b-203ENSMUST00000223725 2669 ntBASIC15.9■□□□□ 0.14
U2af1Q9D883 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
U2af1Q9D883 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
U2af1Q9D883 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.9■□□□□ 0.14
U2af1Q9D883 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC15.9■□□□□ 0.14
U2af1Q9D883 Mir7677-201ENSMUST00000184226 67 ntBASIC15.9■□□□□ 0.14
U2af1Q9D883 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.9■□□□□ 0.14
U2af1Q9D883 AU022133-201ENSMUST00000200601 873 ntBASIC15.9■□□□□ 0.14
U2af1Q9D883 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
U2af1Q9D883 Gm8956-201ENSMUST00000203939 825 ntBASIC15.9■□□□□ 0.14
U2af1Q9D883 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC15.9■□□□□ 0.14
U2af1Q9D883 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
U2af1Q9D883 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
U2af1Q9D883 Gm10152-201ENSMUST00000193475 1344 ntBASIC15.9■□□□□ 0.14
U2af1Q9D883 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
U2af1Q9D883 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
U2af1Q9D883 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
U2af1Q9D883 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.89■□□□□ 0.13
U2af1Q9D883 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.89■□□□□ 0.13
U2af1Q9D883 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.89■□□□□ 0.13
U2af1Q9D883 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 Gm11509-201ENSMUST00000117358 325 ntBASIC15.89■□□□□ 0.13
U2af1Q9D883 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.89■□□□□ 0.13
U2af1Q9D883 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
U2af1Q9D883 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
U2af1Q9D883 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 Gm17931-201ENSMUST00000208132 634 ntBASIC15.89■□□□□ 0.13
U2af1Q9D883 AC121960.1-201ENSMUST00000227982 564 ntBASIC15.89■□□□□ 0.13
U2af1Q9D883 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
U2af1Q9D883 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC15.89■□□□□ 0.13
U2af1Q9D883 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
U2af1Q9D883 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
U2af1Q9D883 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
U2af1Q9D883 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
U2af1Q9D883 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
U2af1Q9D883 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
U2af1Q9D883 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC15.88■□□□□ 0.13
U2af1Q9D883 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.88■□□□□ 0.13
U2af1Q9D883 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.88■□□□□ 0.13
U2af1Q9D883 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms