Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Chaf1bQ9D0N7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chaf1bQ9D0N7 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chaf1bQ9D0N7 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Chaf1bQ9D0N7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chaf1bQ9D0N7 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chaf1bQ9D0N7 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chaf1bQ9D0N7 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Gm12091-201ENSMUST00000146791 830 ntBASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Gm4768-201ENSMUST00000206199 686 ntBASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Chaf1bQ9D0N7 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Gm27331-201ENSMUST00000183705 60 ntBASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Gm6007-201ENSMUST00000208170 823 ntBASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chaf1bQ9D0N7 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms