Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Gm11424-201ENSMUST00000121929 829 ntBASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Gm27701-201ENSMUST00000184498 110 ntBASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Gm37497-201ENSMUST00000195830 798 ntBASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Gm45384-201ENSMUST00000210451 277 ntBASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Gm24526-201ENSMUST00000082921 158 ntBASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Gm24136-201ENSMUST00000083374 165 ntBASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim13Q9CYB0 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Gm7287-201ENSMUST00000205267 602 ntBASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim13Q9CYB0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim13Q9CYB0 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.21□□□□□ -0.62
Trim13Q9CYB0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trim13Q9CYB0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.21□□□□□ -0.62
Trim13Q9CYB0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim13Q9CYB0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim13Q9CYB0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim13Q9CYB0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trim13Q9CYB0 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms