Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Gm19163-201ENSMUST00000223313 780 ntBASIC10.93□□□□□ -0.66
Krt88Q9CPR6 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Krt88Q9CPR6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm13369-201ENSMUST00000119442 987 ntBASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm12036-201ENSMUST00000120008 530 ntBASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm11964-201ENSMUST00000120982 444 ntBASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm12091-201ENSMUST00000146791 830 ntBASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm6745-201ENSMUST00000199216 526 ntBASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm9794-201ENSMUST00000202370 423 ntBASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm7653-201ENSMUST00000214567 508 ntBASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm15823-201ENSMUST00000064305 670 ntBASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Krt88Q9CPR6 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Gm9083-201ENSMUST00000120423 819 ntBASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Gm23119-201ENSMUST00000158610 140 ntBASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Gm18304-201ENSMUST00000189162 546 ntBASIC10.91□□□□□ -0.66
Krt88Q9CPR6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Gm32025-201ENSMUST00000217960 307 ntBASIC10.91□□□□□ -0.66
Krt88Q9CPR6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Krt88Q9CPR6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms