Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Gm12390-201ENSMUST00000117897 397 ntBASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Gm11814-201ENSMUST00000119515 929 ntBASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Mir7085-201ENSMUST00000184353 66 ntBASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Gm4034-201ENSMUST00000187674 480 ntBASIC11.9□□□□□ -0.5
Trim8Q99PJ2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.9□□□□□ -0.5
Trim8Q99PJ2 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim8Q99PJ2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim8Q99PJ2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trim8Q99PJ2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Gm23119-201ENSMUST00000158610 140 ntBASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Gm7561-201ENSMUST00000211203 886 ntBASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Gm22058-201ENSMUST00000083393 310 ntBASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim8Q99PJ2 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim8Q99PJ2 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms