Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac9Q99N13 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.25□□□□□ -0.13
Hdac9Q99N13 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.25□□□□□ -0.13
Hdac9Q99N13 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.25□□□□□ -0.13
Hdac9Q99N13 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.25□□□□□ -0.13
Hdac9Q99N13 n-R5s64-201ENSMUST00000102019 119 ntBASIC14.25□□□□□ -0.13
Hdac9Q99N13 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Gm8731-201ENSMUST00000118088 412 ntBASIC14.25□□□□□ -0.13
Hdac9Q99N13 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Gm13182-201ENSMUST00000122241 312 ntBASIC14.25□□□□□ -0.13
Hdac9Q99N13 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC14.25□□□□□ -0.13
Hdac9Q99N13 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Gm37905-201ENSMUST00000195310 341 ntBASIC14.25□□□□□ -0.13
Hdac9Q99N13 Gm42518-201ENSMUST00000196277 938 ntBASIC14.25□□□□□ -0.13
Hdac9Q99N13 Gm5714-201ENSMUST00000197343 566 ntBASIC14.25□□□□□ -0.13
Hdac9Q99N13 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hdac9Q99N13 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.25□□□□□ -0.13
Hdac9Q99N13 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hdac9Q99N13 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.25□□□□□ -0.13
Hdac9Q99N13 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.24□□□□□ -0.13
Hdac9Q99N13 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Grk6-205ENSMUST00000224653 2976 ntBASIC14.24□□□□□ -0.13
Hdac9Q99N13 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Gm12579-201ENSMUST00000118040 783 ntBASIC14.24□□□□□ -0.13
Hdac9Q99N13 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Gm15610-201ENSMUST00000120584 195 ntBASIC14.24□□□□□ -0.13
Hdac9Q99N13 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Rn7s6-201ENSMUST00000175005 291 ntBASIC14.24□□□□□ -0.13
Hdac9Q99N13 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Mir6998-201ENSMUST00000183343 64 ntBASIC14.24□□□□□ -0.13
Hdac9Q99N13 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hdac9Q99N13 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.24□□□□□ -0.13
Hdac9Q99N13 AC122350.1-201ENSMUST00000228135 533 ntBASIC14.24□□□□□ -0.13
Hdac9Q99N13 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.24□□□□□ -0.13
Hdac9Q99N13 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms