Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Paupar-201ENSMUST00000194826 3482 ntBASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Gm11801-201ENSMUST00000117807 746 ntBASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Gm11511-201ENSMUST00000118146 540 ntBASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Gm16071-201ENSMUST00000119589 793 ntBASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Gm13937-201ENSMUST00000121000 988 ntBASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Gm23119-201ENSMUST00000158610 140 ntBASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Gm17826-201ENSMUST00000189720 798 ntBASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Gm43186-201ENSMUST00000198130 824 ntBASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Gm45575-201ENSMUST00000210283 548 ntBASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Gm2875-201ENSMUST00000211333 360 ntBASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Gm9797-202ENSMUST00000218003 294 ntBASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gm13600-201ENSMUST00000117949 744 ntBASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gm15352-201ENSMUST00000118696 270 ntBASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gm8737-201ENSMUST00000122208 642 ntBASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gm23045-201ENSMUST00000175041 96 ntBASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gm17877-201ENSMUST00000192578 814 ntBASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gm43520-201ENSMUST00000197996 164 ntBASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gm42657-201ENSMUST00000201746 211 ntBASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gm45120-201ENSMUST00000208880 408 ntBASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx6-1Q99MA9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms