Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm23912-201ENSMUST00000104687 87 ntBASIC11.74□□□□□ -0.53
Cstf3Q99LI7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Gm43133-201ENSMUST00000197472 463 ntBASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.74□□□□□ -0.53
Cstf3Q99LI7 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.74□□□□□ -0.53
Cstf3Q99LI7 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Map1b-203ENSMUST00000223725 2669 ntBASIC11.73□□□□□ -0.53
Cstf3Q99LI7 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Gm25857-201ENSMUST00000082788 129 ntBASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cstf3Q99LI7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Gm14127-201ENSMUST00000117906 678 ntBASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Gm2546-201ENSMUST00000182630 991 ntBASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms